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Self-Directed IRA Basics

What SDIRAs Are and How To Open an Account

Written By: Daniel Gleich

What Is a Self-Directed IRA?

A Self-Directed IRA (SDIRA) is a retirement account that you contribute funds to so that your retirement funds can grow through your investments. They are similar to standard IRAs, but they do have some important differences to be aware of. The most notable difference between a standard IRA and a Self-Directed IRA is the types of investments the  accounts can hold. A standard IRA allows you to invest in publicly traded products like stocks, bonds, and mutual funds. With a Self-Directed IRA, you can choose to invest in almost any type of alternative asset. It's common to use a self-directed retirement account for investing in real estateprecious metals, and private placements.

Self-Directed IRAs at a Glance

Coin being inserted into a piggy bank to show the benefit of the potential for steady returns when you invest in private credit with a Self-Directed IRA.

Invest Beyond 
Wall Street

Invest in alternative assets such as real estate, private placements, promissory notes, and beyond.

Increasing trend bar graph with arrow pointing up to show that you can diversify your portfolio and grow your retirement savings when you invest in alternative assets with a Self-Directed IRA.

Diversify Your Portfolio


Diversify your portfolio, invest based on what is important to you, and believe in, and hedge against the stock market.

Hand holding bag of money icon to show that Madison Trust Self-Directed IRAs have low fees.

Low Fees


Our fees are among the lowest in the industry and they are set at a fixed rate regardless of the value in your account. 

Simple Three-Step Setup

Setting up an SDIRA is easy. Just open an account, fund your account, and place your investment.

Understanding Self-Directed IRAs

There are lots of different terms that you may have heard floating around Self-Directed IRAs, like: "self-directed retirement account," "self-funded IRAs," "alternative IRA," or "self-managed IRA." Some clarity may be needed, and we can help, with answers to questions like:  

  • What exactly is a self-managed IRA?
  • What are the benefits?
  • What possible effects can this account have as part of your retirement investment strategy?
  • Who can help you to better understand self-directed investing and IRA basics?
Investment Sponsor filling out paperwork and smiling talking to a knowledgeable Self-Directed IRA custodian.

If you're looking to start self-directed investing, you're in the right place! We can help you learn. The Self-Directed IRA Specialists at Madison Trust off the expert financial advice needed to help you make confident choices regarding your retirement investments.

When You Have Questions About Self-Directed IRA Management and Retirement Account Basics, We Have Answers!

Our financial professionals are here to assist you at any point of the process, from account setup all the way to placing your investment. Start the conversation today.

Why Have I Never Heard of Self-Directed IRAs?

The majority of investors hold their IRAs in large brokerage houses, and it is largely assumed that IRAs can only be invested in stocks, bonds, and mutual funds, since those are the most common investment products offered. Brokerage houses generally do not accommodate alternative investments, including Self-Directed investments and SDIRAs, due to certain administrative tasks involved and potential losses of commission.

What Are the Benefits of Self-Directed Investing?

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Portfolio 
Diversification

Self-Directed IRAs allow investors to diversify their retirement portfolios to include assets that are typically prohibited in a standard IRA. With a self-directed retirement account, you can invest in privately held investments within a tax-advantaged account.

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Hands-On Self-Directed Investing

Self-Directed investment accounts encourage investors to put their money into what they are familiar with and invest in ways that make sense for them. Different people have different strengths and expertise, and their investments should reflect those strengths.

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Stability

Diversifying beyond the volatility of the stock market and investing in products with a generally steadier, more reliable revenue stream is attractive to many who are concerned about market ebbs and flows. Alternative assets may offer increased stability.

How Does a Self-Directed IRA Work?

Like its standard counterpart, a self-directed account is held by a regulated custodian. The custodian will hold custody of your assets, execute transactions, and assist with any necessary tax filings. Once your account is established and you're looking to make a specific investment, here are the basic steps:

Choose an Asset: This part is fully up to the investor. 
SDIRA custodians cannot offer specific financial advice. Consider choosing an asset for which you have a good grasp of its potential profitability as well as one that you have the means to manage.

Submit an Investment Authorization Form: Fill out the Investment Authorization form and submit it to your SDIRA custodian. The custodian will then perform the transaction on your behalf. Of course, certain assets will have more extensive paperwork associated with their purchase; this is not due to the account structure but rather to the nature of the investment itself.

What Are the Potential Risks of SDIRAs?

Due Diligence

As a Self-Directed IRA account holder, it is your responsibility to understand your investment and the Self-Directed IRA rules set by the IRS. These retirement accounts are self-directed, self-managed, self-controlled, and self-funded. They offer a great deal of customization, but with that level of customization comes the responsibility to be well-informed and up-to-date on the rules and best practices of self-directed investing. 

It is the Self-Directed IRA custodian’s responsibility to administer your account and hold your IRA’s assets; they legally cannot sell investment products, verify legitimacy, or give investment advice. It is considered best practice to conduct due diligence and speak with a financial advisor before making an investment decision.

Fees

Like standard brokerage accounts, Self-Directed IRA fees vary based on the custodian. Potential fees can include account opening fees, annual account maintenance fees, administrative fees, and transaction fees. Among the lowest in the industry, Madison Trust’s flat-rate fees help ensure the profitability of your investment. For a transparent look at our fees, please refer to the fee schedule.

Potential Fraud

In today’s technology-centered world, it’s important to be highly vigilant against fraud, and when you make any important purchase, it is essential to ask questions. Consult a trusted financial professional before making an investment decision. Custodians who guarantee a return on investment, give advice, or want you to act quickly should be reviewed with a critical eye and may be indicative of fraudulent activity.

To debunk some of the most common self-directed investing myths, check out our blog, where we've written about
Self-Directed IRA investment myths and SDIRA misconceptions

For further reading, explore this entry: With Great Risk, Comes Great Reward: Self-Directed IRA Investor Alert Response.

What Can a Self-Directed IRA Invest In?

Self-Directed IRAs can legally invest in almost any asset. The only assets that are off-limits are collectibles, life insurance, 
and S-Corporation stock. Some of the more popular investments include:

Icon of a tall building to signify investing in real estate with a Self-Directed IRA.
Real Estate
(Rentals, Commercial Property, Raw Land, etc.)
Icon of dollar bill and coins to show that you can invest in private placements with a Self-Directed IRA.
Private Placements
(Private Equity Funds, Hedge Funds, etc.)
Icon of documents with a dollar sign on it to signify that you can invest in promissory notes with a Self-Directed IRA.
Promissory Notes
(Secured and Unsecured)
Icon of a rocket ship to indicate that you can invest in startups and crowdfunding with a Self-Directed IRA.
Startups and Crowdfunding
Stack of bullion to show that you can invest in precious metals with a Self-Directed IRA.
Precious Metals
And Many More Alternative Assets

Are There Different Types of Self-Directed Retirement Accounts?

Yes. You can choose to open a classic Self-Directed IRA or a Self-Directed IRA with Checkbook Control (also known as a Checkbook IRA).

SDIRA

This account allows you to invest in alternative assets beyond stocks, bonds, and mutual funds.

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Optimized for low-transaction investments, like private placements and precious metals
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Place investments by instructing your custodian, such as Madison Trust, to send your SDIRA funds by writing a check or sending a wire directly to your investment
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Simple and low-cost setup, with no LLC or trust required

SDIRA with Checkbook Control (Checkbook IRA)

This self-directed investment account allows you to perform your everyday transactions in real time. This investing power is achieved through the creation of an IRA LLC or IRA Trust.

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Optimized for transaction-heavy investments, like rental properties and fix-and-flips
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Place investments by simply writing a check or sending a wire from your Checkbook IRA's designated checking account
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Broad Financial, Madison Trust's sister company, will create the entity (LLC or trust) for you to provide a seamless account setup experience
Learn More

Self-Directed IRA vs. Standard IRA: What's the Difference?

One concept that almost all investors and financial advisors can agree on is the importance of diversifying your investment portfolio. Investing in a variety of assets, including Wall Street products (stocks, bonds, and mutual funds) and alternative assets may reduce overall investment risk. 

But you still may be wondering, "Which IRA is best for me?" Below are some of the basic differences between a standard IRA and an SDIRA.

Standard IRA
Self-Directed IRA
Asset Choice
Typically offers Wall Street products. These can be individual stocks as offered by online trading platforms or aggregated products like mutual funds.
Typically offers a diverse asset choice. Investors can purchase real estate, shares in a private business, precious metals, and more. Almost any asset can be purchased, except collectibles, life insurance, and S-Corporation stock.
Asset Security
No guaranteed security. The value of the IRA will generally rise and fall with the stock market.
No guaranteed security. Some assets, like real estate, tend to retain value, while others can be generally more volatile.
IRS Rules
All IRAs (individual retirement accounts) are subject to certain IRS rules.
A Self-Directed IRA follows the same rules as a standard IRA. However, due to the more hands-on nature of the account, account holders are encouraged to conduct their own due diligence and understand rules like prohibited transactions.
Custodian
Must be held by a regulated custodian as required by the IRS. Most banks, brokerages, and online trading platforms offer IRAs.
Standard IRA
Asset Choice
Standard stock market products.
Fees
Standard fee schedules are asset-based. That means a defined percentage of the overall account will be assessed as the annual fee.
Account Opening
Depending on the institution chosen, can be done in 15 minutes.
IRS Rules
All retirement accounts are subject to the same rules.
Self Directed IRA
Asset Choice
Diverse asset choice.
Fees
Different Self Directed IRA companies have different fee structures. Madison Trust charges a flat annual fee that is not dependent on account value.
Account Opening
Madison’s Self Directed IRA can be opened in 15 minutes. A Checkbook Control Self Directed IRA can take longer to set up due to the establishment of the LLC or Trust.
IRS Rules
A Self Directed IRA has the same rules as a standard IRA.

Diversification Beyond Wall Street

Reach out and one of our Self-Directed IRA Specialists will help you get started on your self-directed investing path.

Setting Up a Self-Directed IRA

The process to set up a Self-Directed IRA with Madison Trust is simple. Our specialists can guide you through the entire process, from setting up your account to placing your investment.

For more information on our simple setup process, you can also download the How to Invest With a Self-Directed IRA at Madison Trust PDF.
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Open a Self-Directed IRA

Open a self-directed retirement account with Madison Trust by completing our easy online application.
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Fund Your Account

Fund your Self-Directed IRA by transferring or rolling over all or a portion of your funds from an existing retirement account, such as an IRA or 401(k), or by making an initial contribution.​
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Investor Standing Holding Check Icon to show placing an investment with a Self-Directed IRA.

Place Your Investment

Instruct Madison Trust to send your IRA funds by writing a check or sending a wire directly to your investment.

How Much Does it Cost to Use a Self-Directed IRA?

The cost to set up a self-directed account with Madison Trust is $50; maintenance is $110 per quarter. Our quarterly maintenance fees are flat-rate, no matter what the value of your account is. We never charge asset-based holding fees which are fees that are charged at a percentage that’s based on the value of your account. With Madison Trust, you never have to pay more for being successful. Visit our transparent fee schedule page for more information.

What Are the Contribution Limits for a Self-Directed IRA?

The IRS places annual limits on the amount that can be contributed to a retirement account. For 2025, the Self-Directed IRA maximum contribution is $7,000 if you're under age 50. If you're age 50+, you could make an additional $1,000 catch-up contribution ($8,000 maximum contribution). For more information on Self-Directed IRA contributions, please visit our frequently asked questions.
Please note the maximum contribution limits can change on a yearly basis. Madison Trust's SDIRA experts are always happy to answer any questions you may have.

Our Story

Madison Trust is an industry-leading Self-Directed IRA custodian with a passion for empowering individuals to gain control of their retirement investing. Learn more about our story from our President and CEO, Daniel Gleich.

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Check out our schedule of upcoming webinars and view our previously recorded webinars to learn about Self-Directed IRAs, alternative investments, trending industry topics, and more!

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Whether you're interested in learning about what you can invest in or you need a guide to help set up your account, you can find all the help and information you need in our blog. Be sure to check back regularly to stay up-to-date on all of the information you need to know about investing with a Self-Directed IRA.

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Explore our informative gallery of articles and videos discussing topics such as the essentials of Self-Directed IRAs, fundamental aspects of Real Estate IRAs, investing in gold with your IRA, and more in our Self-Directed IRA resource center!

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Ready to Get Started? We're Here for You! 

Madison Trust offers self-directed investing services that are easy to get started with! Our dedicated Self-Directed IRA Specialists offer step-by-step guidance to walk you through the process. 

It's time to start investing in what you know and believe in with a Madison Trust Self-Directed IRA!

Self-Directed IRA FAQs

How Much Does a Self-Directed IRA Cost?

Among the lowest in the industry, Madison Trust offers competitive flat fees set at a fixed rate regardless of the value of your account. For more information, visit our fee schedule.

When Can You Take Distributions From a Self-Directed IRA? 

To start withdrawing funds from your Self-Directed IRA you must be at least age 59 ½. If you opened a Self-Directed Traditional IRA, versus a Self-Directed Roth IRA, you must take the required minimum distributions (RMDs) each year after you turn age 73.

To receive funds earned through your Self-Directed Roth IRA investments without penalty, you must reach age 59 ½ and have the account opened for at least five years. Self-Directed Roth IRA contributions can be withdrawn at any time.

To learn more about distributions, visit our page on distribution rules.

How Long Does it Take to Set Up an SDIRA?

Madison Trust strives to make your SDIRA account setup fast and simple. Once you fill out our easy online application, it typically takes about one to two weeks for your account to be funded.* Once your account is opened and funded, simply place an investment by instructing Madison Trust to send your funds directly to the investment of your choice.

Please note, that our processing timeframe does not include the transferring institution’s processing time. Turnaround time and delivery method back to Madison Trust are subject to the external institution’s processing times and procedures.

Can I Roll My 401(k) Into a Self-Directed IRA?

Yes, you can roll over all or a portion of your 401(k) into a Self-Directed IRA. To do so, you will start by contacting your existing 401(k)’s plan administrator. For more information, view our quick guide to funding an SDIRA with your 401(k).

What Are the Tax Advantages of Self-Directed IRAs?

All income from an investment returns directly back to the Self-Directed IRA without being taxed and without being added to your personal taxable income for that year. You can reinvest these earnings into another opportunity and keep growing your retirement savings in a tax-advantaged environment.

Like standard IRAs, potential tax benefits vary depending on your account type. If you have a Self-Directed Traditional IRA, you can lower your income tax owed when you contribute to your account. If you have a Self-Directed Roth IRA, you pay taxes upfront, but you can take out your earnings tax-free in retirement.

Do I Need a Custodian for My Self-Directed IRA?

Yes! All IRAs must be held by a regulated custodian. A Self-Directed IRA custodian is responsible for administering the retirement account and holding custody of the IRA’s assets. Read our guidelines on how to choose the right SDIRA Custodian to learn more.

Can Anyone Open a Self-Directed IRA?

Yes! Anyone can open a Self-Directed IRA. But to contribute, the investor must earn taxable income.

How Much Money Can You Put in a Self-Directed Retirement Account?

The contribution limits for a Self-Directed IRA are the same as a standard IRA. If you are younger than 50 years old, you could contribute up to $7,000 in 2025. If you are age 50+, you could contribute up to $8,000 in 2025. Contributions for the year prior must be made by the tax filing deadline. For more information, visit our contributions FAQs.

In addition to annual contributions, you may also transfer or roll over all or of a portion of your funds from an existing qualified retirement account, such as an IRA or 401(k).

Do I Need an LLC With My Self-Directed IRA?

You are not required to establish an LLC to invest in an alternative asset. Depending on your specific investments’ needs, establishing a Self-Directed IRA LLC may be beneficial. An IRA LLC enables you to invest your retirement money directly into the investment of your choice without having to contact your custodian for your everyday transactions. IRA LLCs are optimized for transaction-heavy investments, such as real estate rentals and fix-and-flips.

Do You Have to File Taxes for a Self-Directed IRA?

As a self-directed account holder, you do not need to file an annual tax return. However, each year you must provide your SDIRA custodian with the fair market value (FMV) of your account. Read our IRS tax tips for retirement accounts for more information.

Your self-directed retirement account would likely owe taxes if it generated business or trade income that is not related to the tax-exempt purpose of the IRA (Unrelated Business Income Tax) or when debt is leveraged to purchase an asset with your IRA (Unrelated Debt Financed Income).

What Are Prohibited Transactions in a Self-Directed Retirement Account?

A prohibited transaction is a transaction that involves the account holder or other disqualified persons benefiting from the IRA’s investments. A good rule of thumb is that an IRA may transact with third parties but may not transact with close family members or closely held entities.

How Do I Distribute Assets From an SDIRA?

To make a distribution from a Self-Directed IRA, complete a Distribution Request Form that details the distribution type, amount, and frequency of the distribution. If you are distributing an asset, please also submit a third-party certified value (i.e., an appraisal, letter from an investment sponsor, CPA-certified valuation, etc.). Depending on the asset, additional documents may also need to be submitted.

After the documents are submitted and approved, Madison Trust will send an Assignment of Interest to you. This documents the transfer of ownership from your IRA to your personal possession.

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